Software

aln_order

— A travelling salesman problem implementation
Sonja J. Prohaska

Link to the Software

EpiDynaST

— (Epi)genetic (Dyn)amic (S)imulation (T)ool
Nico Herbig, Daniel Meyer, Sonja Prohaska

noisy

— Identify homo-plastic characters in multiple sequence alignments
Christoph Flamm, Sonja J Prohaska, Guido Fritzsch, Peter F Stadler

Link to the Software

Proteinortho

— Orthology detection tool
Marcus Lechner, Lydia Steiner, Sonja J. Prohaska

Link to the Software

SynBlast

— Assisting the analysis of conserved synteny information
Jörg Lehmann, Peter F. Stadler, Sonja J. Prohaska

Link to the Software

TARGETING

— An efficient software package for solving the Maximal Pairing Problem on arbitrary trees
Christian Arnold and Peter F. Stadler

Link to the Software

Tracker 2

— A tool for footprint detection and alignment consistency determination
Wolfgang Otto, Peter F. Stadler and Sonja J Prohaska

Link to the Software

WagnerTest

Guenter P. Wagner, Claudia Fried, Sonja J. Prohaska, Peter F. Stadler

Link to the Software

Bioinf

— Software produced by the group of Peter Stadler

Link to the Software